D.O.I. |
Title |
Author(s) |
Title of the periodical or the series |
Date of publication |
Open access |
10.1097/QAD.00000000000 00565 |
Plaque burden in HIV-infected patients is associated with serum intestinal microbiota-generated trimethylamine |
Suman Srinivasa , Kathleen V. Fitch , Janet Lo , Hanane Kadar , Rachel Knight , Kimberly Wong , Suhny Abbara , Dominique Gauguier , Jacqueline Capeau , Franck Boccara , Steven K. Grinspoon |
AIDS |
01/01/2015 |
No |
10.1242/dmm.017400 |
How informative is the mouse for human gut microbiota research? |
T. L. A. Nguyen , S. Vieira-Silva , A. Liston , J. Raes |
DMM Disease Models and Mechanisms |
01/01/2015 |
Yes |
10.1017/S00296651140015 66 |
Functional metagenomics to decipher food–microbe–host crosstalk |
Pierre Larraufie , Tomas de Wouters , Gabrielle Potocki-Veronese , Hervé M. Blottière , Joël Doré |
Proceedings of the Nutrition Society |
01/02/2015 |
No |
|
Akkermansia Muciniphila and Gut Microbiota Richness are Associated with Improved Metabolic Status after Calorie Restriction |
Maria Dao, Amandine Everard, Judith Aron-Wisnewsky, Nataliya Sokolovska, Eric Verger, Salwa Rizkalla, Joel Doré, Patrice Cani and Karine Clément |
FASEB Journal |
01/04/2015 |
No |
10.1371/journal.pone.0125 718 |
Bariatric Surgery Induces Disruption in Inflammatory Signaling Pathways Mediated by Immune Cells in Adipose Tissue: A RNA-Seq Study |
Christine Poitou , Claire Perret , François Mathieu , Vinh Truong , Yuna Blum , Hervé Durand , Rohia Alili , Nadjim Chelghoum , Véronique Pelloux , Judith Aron-Wisnewsky , Adriana Torcivia , Jean-Luc Bouillot , Brian W. Parks , Ewa Ninio , Karine Clément , Laurence Tiret |
PLoS One |
04/05/2015 |
No |
10.1136/gutjnl-2014-3087 78 |
Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology |
M. C. Dao , A. Everard , J. Aron-Wisnewsky , N. Sokolovska , E. Prifti , E. O. Verger , B. D. Kayser , F. Levenez , J. Chilloux , L. Hoyles , M.-E. Dumas , S. W. Rizkalla , J. Dore , P. D. Cani , K. Clement , S. Le Mouhaer , A. Cotillard , S. P. Kennedy , N. Pons , E. Le Chatelier , M. Almeida , B. Quinquis , N. Galleron , J.-M. Batto , P. Renault , J.-D. Zucker , S. D. Ehrlich , H. Blottiere , M. Leclerc , C. Juste , T. de Wouters , P. Lepage |
Gut |
01/06/2015 |
No |
10.1016/j.mib.2015.04.004 |
Metagenomics meets time series analysis: unraveling microbial community dynamics |
Karoline Faust , Leo Lahti , Didier Gonze , Willem M de Vos , Jeroen Raes |
Current Opinion in Microbiology |
01/06/2015 |
Yes |
10.1136/gutjnl-2015-3096 18 |
Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates |
D. Vandeputte , G. Falony , S. Vieira-Silva , R. Y. Tito , M. Joossens , J. Raes |
Gut |
11/06/2015 |
Yes |
10.3389/fgene.2015.00219 |
From next-generation sequencing to systematic modeling of the gut microbiome |
Boyang Ji , Jens Nielsen |
Frontiers in Genetics |
23/06/2015 |
Yes |
10.1016/j.cmet.2015.05.02 0 |
Jejunal T Cell Inflammation in Human Obesity Correlates with Decreased Enterocyte Insulin Signaling |
Milena Monteiro-Sepulveda , Sothea Touch , Carla Mendes-Sá , Sébastien André , Christine Poitou , Omran Allatif , Aurélie Cotillard , Hélène Fohrer-Ting , Edwige-Ludiwyne Hubert , Romain Remark , Laurent Genser , Joan Tordjman , Kevin Garbin , Céline Osinski , Catherine Sautès-Fridman , Armelle Leturque , Karine Clément , Edith Brot-Laroche |
Cell Metabolism |
01/07/2015 |
No |
10.1016/j.copbio.2014.12.0 13 |
New paradigms for metabolic modeling of human cells |
Adil Mardinoglu , Jens Nielsen |
Current Opinion in Biotechnology |
01/08/2015 |
No |
10.1016/j.cmet.2015.07.001 |
Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome |
Saeed Shoaie , Pouyan Ghaffari , Petia Kovatcheva-Datchary , Adil Mardinoglu , Partho Sen , Estelle Pujos-Guillot , Tomas de Wouters , Catherine Juste , Salwa Rizkalla , Julien Chilloux , Lesley Hoyles , Jeremy K. Nicholson , Joel Dore , Marc E. Dumas , Karine Clement , Fredrik Bäckhed , Jens Nielsen |
Cell Metabolism |
01/08/2015 |
No |
10.1016/j.cmet.2015.07.009 |
Roux-en-Y Gastric Bypass and Vertical Banded Gastroplasty Induce Long-Term Changes on the Human Gut Microbiome Contributing to Fat Mass Regulation |
Valentina Tremaroli , Fredrik Karlsson , Malin Werling , Marcus Ståhlman , Petia Kovatcheva-Datchary , Torsten Olbers , Lars Fändriks , Carel W. le Roux , Jens Nielsen , Fredrik Bäckhed |
Cell Metabolism |
01/08/2015 |
Yes |
10.1016/j.ebiom.2015.07.0 07 |
Dietary Modulation of Gut Microbiota Contributes to Alleviation of Both Genetic and Simple Obesity in Children |
Chenhong Zhang et al |
EBioMedicine |
01/08/2015 |
|
10.1016/j.abb.2015.09.016 |
Application of quantitative metabolomics in systems genetics in rodent models of complex phenotypes |
Dominique Gauguier |
Archives of Biochemistry and Biophysics |
01/09/2015 |
No |
10.1096/fj.15-276675 |
Adipose tissue adaptive response to trans-10,cis-12-conjugated linoleic acid engages alternatively activated M2 macrophages |
M. Pini , S. Touch , H. Poirier , E. Dalmas , I. Niot , C. Rouault , C. Druart , N. Delzenne , K. Clement , S. Andre , M. Guerre-Millo |
FASEB Journal |
11/09/2015 |
No |
10.15252/msb.20156487 |
The gut microbiota modulates host amino acid and glutathione metabolism in mice |
A. Mardinoglu , S. Shoaie , M. Bergentall , P. Ghaffari , C. Zhang , E. Larsson , F. Backhed , J. Nielsen |
Molecular Systems Biology |
01/10/2015 |
Yes |
10.15252/msb.20156487 |
The gut microbiota modulates host amino acid and glutathione metabolism in mice |
A. Mardinoglu , S. Shoaie , M. Bergentall , P. Ghaffari , C. Zhang , E. Larsson , F. Backhed , J. Nielsen |
Molecular Systems Biology |
01/10/2015 |
Yes |
10.1038/srep14841 |
Extensive weight loss reveals distinct gene expression changes in human subcutaneous and visceral adipose tissue |
Adil Mardinoglu , John T. Heiker , Daniel Gärtner , Elias Björnson , Michael R. Schön , Gesine Flehmig , Nora Klöting , Knut Krohn , Mathias Fasshauer , Michael Stumvoll , Jens Nielsen , Matthias Blüher |
Scientific Reports |
05/10/2015 |
Yes |
10.1371/journal.pone.0138 880 |
Lactobacillus rhamnosus CNCMI-4317 Modulates Fiaf/Angptl4 in Intestinal Epithelial Cells and Circulating Level in Mice |
Elsa Jacouton , Núria Mach , Julie Cadiou , Nicolas Lapaque , Karine Clément , Joël Doré , Johan E. T. van Hylckama Vlieg , Tamara Smokvina , Hervé M Blottière |
PLoS One |
06/10/2015 |
|
10.1146/annurev-micro-091014-104422 |
Microbiology Meets Big Data: The Case of Gut Microbiota–Derived Trimethylamine |
Gwen Falony , Sara Vieira-Silva , Jeroen Raes |
Annual Review of Microbiology |
15/10/2015 |
No |
10.1016/j.coph.2015.09.013 |
The microbiome and its pharmacological targets: therapeutic avenues in cardiometabolic diseases |
Ana Luisa Neves , Julien Chilloux , Magali H Sarafian , Mohd Badrin Abdul Rahim , Claire L Boulangé , Marc-Emmanuel Dumas |
Current Opinion in Pharmacology |
01/12/2015 |
No |
10.1186/s13059-015-0639-8 |
Temporal and technical variability of human gut metagenomes |
Anita Y Voigt , Paul I Costea , Jens Roat Kultima , Simone S Li , Georg Zeller , Shinichi Sunagawa , Peer Bork |
Genome Biology |
01/12/2015 |
Yes |
10.1186/s13059-015-0646-9 |
Inter-individual differences in the gene content of human gut bacterial species |
Ana Zhu , Shinichi Sunagawa , Daniel R Mende , Peer Bork |
Genome Biology |
01/12/2015 |
Yes |
10.1016/j.coph.2015.09.013 |
The microbiome and its pharmacological targets: therapeutic avenues in cardiometabolic diseases |
Ana Luisa Neves , Julien Chilloux , Magali H Sarafian , Mohd Badrin Abdul Rahim , Claire L Boulangé , Marc-Emmanuel Dumas |
Current Opinion in Pharmacology |
01/12/2015 |
Yes |
10.1038/nature15766 |
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota |
Kristoffer Forslund , Falk Hildebrand , Trine Nielsen , Gwen Falony , Emmanuelle Le Chatelier , Shinichi Sunagawa , Edi Prifti , Sara Vieira-Silva , , , Karsten Kristiansen , Anita Yvonne Voigt , Henrik Vestergaard , Rajna Hercog , Paul Igor Costea , Jens Roat Kultima , Junhua Li , Torben Jørgensen , Florence Levenez , Joël Dore , H. Bjørn Nielsen , Søren Brunak , Jeroen Raes , Torben Hansen , Jun Wang , S. Dusko Ehrlich , Peer Bork , Oluf Pedersen |
Nature |
02/12/2015 |
|